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PhyML aborts during TBE bootstrap in alrt.c:904 after small likelihood decrease

Status: Open.

#214 In stephaneguindon/phyml;

· Menichelli opened on Jun 10, 2026

Please support Linux/arm64

Status: Open.

#211 In stephaneguindon/phyml;

· charles-plessy opened on Jan 18, 2026

Approximate likelihood flag y/n

Status: Open.

#210 In stephaneguindon/phyml;

· stephaneguindon opened on Nov 21, 2025

Constrained topology for ancestral reconstruction

Status: Open.

#200 In stephaneguindon/phyml;

· Proginski opened on Nov 29, 2024

PROBLEM TO EXPORT THE TREE

Status: Open.

#199 In stephaneguindon/phyml;

· Deronkof opened on Nov 19, 2024

how to enable AVX?

Status: Open.

#198 In stephaneguindon/phyml;

· liamxg opened on Sep 29, 2024

How can I determine the optimal number of substitution rate categories to use?

Status: Open.

#197 In stephaneguindon/phyml;

· liamxg opened on Aug 19, 2024

which parameters should I use with the "lot of missing data"?

Status: Open.

#195 In stephaneguindon/phyml;

· liamxg opened on Aug 7, 2024

running error

Status: Open.

#192 In stephaneguindon/phyml;

· ceceNo1 opened on Apr 18, 2024

phytime compilation error

Status: Open.

#191 In stephaneguindon/phyml;

· pavelToman opened on Apr 10, 2024

Smart Model Selection

Status: Open.

#190 In stephaneguindon/phyml;

· JamieBregman opened on Mar 25, 2024

error

Status: Open.

#189 In stephaneguindon/phyml;

· liamxg opened on Jan 17, 2024