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@spatial-cell-id

Spatial-Cell-ID

Spatial-Cell-ID is a national Spatial Transcriptomics facility led by ENS of Lyon

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  1. persist-project persist-project Public

    Jupyter Notebook

  2. Guillermin_et_al Guillermin_et_al Public

    Jupyter Notebook

  3. merfish3d-analysis merfish3d-analysis Public

    Forked from QI2lab/merfish3d-analysis

    GPU accelerated post-processing for 2D or 3D imaging spatial transcriptomics data.

    Python

  4. scid2026 scid2026 Public

    Forked from mmistakes/minimal-mistakes

    SCID 2026

    JavaScript

  5. resolute resolute Public

    RESOLUTE is a Python package designed for selecting the optimal clustering resolution in Scanpy-based single-cell and spatial transcriptomics analyses, leveraging geometric metrics and topological …

    Python

  6. Spatial_reconstruction_tools Spatial_reconstruction_tools Public

    Presentations and scripts for benchmarking spatial reconstruction tools.

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