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feat!: store allele origin as mapping, not extension#236

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korikuzma merged 5 commits into
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issue-232
Jul 8, 2026
Merged

feat!: store allele origin as mapping, not extension#236
korikuzma merged 5 commits into
masterfrom
issue-232

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@korikuzma

@korikuzma korikuzma commented Jun 23, 2026

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close #232

Will open once ga4gh/va-spec#404 is approved (making sure system value is okay)

@korikuzma korikuzma self-assigned this Jun 23, 2026
Comment thread civicpy/exports/civic_gks_record.py Outdated
susannasiebert
susannasiebert previously approved these changes Jun 29, 2026

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+1 once tests pass

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@ahwagner changed his mind lol. Changing system back to URL

Comment thread civicpy/exports/civic_gks_record.py Outdated
@korikuzma korikuzma requested a review from susannasiebert June 30, 2026 14:11
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@susannasiebert re-requesting review since Alex changed his mind in a call last evening about using URL for system rather than free-text

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@susannasiebert @acoffman Not sure if you wanted to re-review since there were some changes in how Alex wanted to represent the mapping

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LGTM!

@korikuzma korikuzma merged commit ffe80ef into master Jul 8, 2026
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@korikuzma korikuzma deleted the issue-232 branch July 8, 2026 17:33
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GKS: Store allele origin as mapping not extension

3 participants