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fulbelin/README.md

Fancy seeing you here I'm Belin! 🧬🤖

I am a Bioinformatics Master's student at Saarland University and a research assistant at the Interdisciplinary Institute for Societal Computing. My research interests sit at the intersection of Multimodal AI, Genomics, and Data Engineering.

Current Research & Focus

  • Master's Thesis (TUM): Predicting BRAF V600E mutations using Graph-MIL and Foundation Models for H&E Images.
  • Geo-Intelligence (Saarland): Building scalable pipelines for population mobility analysis and high-volume geospatial queries.
  • Data Engineering: Currently learning workflow orchestration with Kestra and cloud infrastructure on GCP.

Tech Stack

Domain Tools & Technologies
ML & AI PyTorch TensorFlow Scikit-Learn
Bioinformatics Snakemake Nextflow HPC BCFtools Seurat Scanpy
Data Engineering Docker PostgreSQL Bash
Languages Python C++ SQL

Featured Projects

  • Saarbrücken Eats: Interactive geospatial dashboard with optimized SQL routing.
  • DNA-Seq Pipeline: Reproducible Snakemake workflow for PacBio BLEND-based analysis.
  • PET-CT Metastasis Prediction: Multimodal attention-based model for cancer diagnosis.
  • Breast Cancer Risk Stratification: A production-grade risk estimation service using the Wisconsin Breast Cancer dataset to classify tumors as malignant or benign. Features a Flask API containerized with Docker and a Streamlit UI for real-time triage support.

📫 Connect with me:

LinkedIn Email Google Scholar

Pinned Loading

  1. cpp-programming cpp-programming Public

    Modern C++20 implementations of algorithms, data structures, and systems-level abstractions with RAII, custom iterators, and performance-aware design.

    C++

  2. is2c is2c Public

    Analyze and visualize location-based data related to restaurants and places in Dudweiler and the Saarland Informatics Campus (SIC) in Saarbrücken

    HTML

  3. PET_CT PET_CT Public

    Implemented a binary classification model to predict lymph node metastasis from PET-CT images of prostate cancer patients using a custom model which does joint-fusion on image and tabular patient d…

    HTML 2

  4. biological-data-processing biological-data-processing Public

    Re-implementations of core computational biology methods, applied to real biological datasets.

    Jupyter Notebook