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fix: consistent specification of optional outputs BactSeq CI #141: Commit 6adfd58 pushed by adamd3
5m 32s develop
develop
5m 32s
refactor: make COUNT_READS plot outputs optional BactSeq CI #140: Commit 62558d4 pushed by adamd3
5m 25s develop
develop
5m 25s
fix: avoid making summary plots when too many samples BactSeq CI #139: Commit 7b20b31 pushed by adamd3
12m 27s develop
develop
12m 27s
Merge pull request #16 from adamd3/develop BactSeq CI #138: Commit c8be24c pushed by adamd3
10m 33s develop
develop
10m 33s
Merge pull request #16 from adamd3/develop BactSeq CI #137: Commit c8be24c pushed by adamd3
10m 53s main
main
10m 53s
Fix: correctly activate env for conda profile BactSeq CI #136: Pull request #16 opened by adamd3
5m 15s develop
develop
5m 15s
Enable conda correctly in profile BactSeq CI #135: Commit e69293f pushed by adamd3
13m 42s develop
develop
13m 42s
feat(tests): Add full pipeline test and remove irrelevant tests BactSeq CI #134: Pull request #14 opened by adamd3
3m 53s develop
develop
3m 53s
Make GFF parsing more robust to variations in gene nomenclature BactSeq CI #133: Commit e7197fb pushed by adamd3
3m 59s main
main
3m 59s
Make GFF parsing more robust to variations in gene nomenclature BactSeq CI #132: Commit e140d56 pushed by adamd3
3m 44s develop
develop
3m 44s
Merge branch 'main' into develop BactSeq CI #131: Commit 576a6e1 pushed by adamd3
6m 33s develop
develop
6m 33s
Add update re: activation of conda env in Docker image BactSeq CI #130: Commit 070517b pushed by adamd3
5m 4s main
main
5m 4s
Merge branch 'main' of github.com:adamd3/BactSeq BactSeq CI #129: Commit bed9d8b pushed by adamd3
4m 38s main
main
4m 38s
Fix Docker container environment for Nextflow 25.04.0 compatibility (… BactSeq CI #128: Commit 4864ba9 pushed by adamd3
4m 35s main
main
4m 35s
Fix Docker container environment for Nextflow 25.04.0 compatibility BactSeq CI #127: Pull request #13 opened by adamd3
2m 20s develop
develop
2m 20s
Use only the environment variables to activate conda env BactSeq CI #126: Commit 3ad6826 pushed by adamd3
4m 59s develop
develop
4m 59s
Add conda environment activation with CONDA_DEFAULT_ENV BactSeq CI #125: Commit cf7c9f2 pushed by adamd3
1m 25s develop
develop
1m 25s
Merge branch 'main' into develop BactSeq CI #124: Commit d82241c pushed by adamd3
4m 49s develop
develop
4m 49s
Update CI to use Nextflow 25.04.0 and clean up debugging BactSeq CI #123: Commit 0471cbb pushed by adamd3
3m 16s develop
develop
3m 16s
Merge branch 'develop' BactSeq CI #122: Commit c36147a pushed by adamd3
8m 0s main
main
8m 0s
Remove debugging from meta module BactSeq CI #121: Commit 3b79e34 pushed by adamd3
9m 7s main
main
9m 7s
Revert to pandas:1.1.5 container for debugging BactSeq CI #120: Commit 458c5d3 pushed by adamd3
12m 26s main
main
12m 26s
Revert to pandas:1.1.5 container for debugging BactSeq CI #119: Commit e37a8e7 pushed by adamd3
4m 41s develop
develop
4m 41s
Add debugging output to MAKE_META_FILE process BactSeq CI #118: Commit 400dfe2 pushed by adamd3
4m 1s develop
develop
4m 1s
remove projectDir path when creating metadata BactSeq CI #117: Commit 9f6ecab pushed by adamd3
2m 59s develop
develop
2m 59s