Invalid cimg_in

[mksigona]

Hello,

I continue to receive an "invalid cmg_in" error when I try to run the docker for skull stripping. Do you have recommendations/examples on how I should orient the volume to ensure they are matching the trained models or if there is a different issue occurring here? I am running the following in the terminal:

docker run --gpus all -v working_dir sandywangrest/deepbet muSkullStrip.py -in input_file -model Site-All-T-epoch_36_update_with_Site_6_plus_7-epoch_09.model

[sandywang]

Is there any info about your nifti file? Like nifti header info？

[sandywang]

AND, how you mount your nifti file into docker?